############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data cytofWorkflow ### ############################################################################## ############################################################################## * checking for file ‘cytofWorkflow/DESCRIPTION’ ... OK * preparing ‘cytofWorkflow’: * checking DESCRIPTION meta-information ... OK * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘cytofWorkflow.Rmd’ using rmarkdown trying URL 'https://zenodo.org/records/10039274/files/PBMC8_metadata.xlsx' Content type 'application/octet-stream' length 56676 bytes (55 KB) ================================================== downloaded 55 KB trying URL 'https://zenodo.org/records/10039274/files/PBMC8_panel_v3.xlsx' Content type 'application/octet-stream' length 6423 bytes ================================================== downloaded 6423 bytes trying URL 'https://zenodo.org/records/10039274/files/PBMC8_cluster_merging1.xlsx' Quitting from cytofWorkflow.Rmd:455-470 [cluster-merging1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `download.file()`: ! cannot open URL 'https://zenodo.org/records/10039274/files/PBMC8_cluster_merging1.xlsx' --- Backtrace: ▆ 1. └─utils::download.file(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'cytofWorkflow.Rmd' failed with diagnostics: cannot open URL 'https://zenodo.org/records/10039274/files/PBMC8_cluster_merging1.xlsx' --- failed re-building ‘cytofWorkflow.Rmd’ SUMMARY: processing the following file failed: ‘cytofWorkflow.Rmd’ Error: Vignette re-building failed. Execution halted