Package: OHCA
Title: Orchestrating Hi-C analysis with Bioconductor
Version: 1.7.0
Date: 2023-04-14
Authors@R: 
    c(person(given = "Jacques",
           family = "Serizay",
           role = c("aut", "cre"),
           email = "jacquesserizay@gmail.com",
           comment = c(ORCID = "0000-0002-4295-0624")))
Description: The primary aim of this book is to introduce the R user to Hi-C 
    analysis. This book starts with key concepts important for the analysis 
    of chromatin conformation capture and then presents Bioconductor tools that 
    can be leveraged to process, analyze, explore and visualize Hi-C data.
License: MIT + file LICENSE
URL: https://github.com/js2264/OHCA
BugReports: https://github.com/js2264/OHCA/issues
Depends: R (>= 4.4),
Imports: HiCExperiment, HiCool, HiContacts, HiContactsData, DNAZooData,
        fourDNData, plyinteractions, GenomicInteractions, terra, Rfast,
        WGCNA, diffHic, strawr, multiHiCcompare, TopDom, GOTHiC,
        BSgenome.Hsapiens.UCSC.hg38, ggbio, cowplot, patchwork, fs,
        knitr, BiocStyle, sessioninfo
biocViews: HiC, DNA3DStructure, FunctionalGenomics
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
BiocType: Book
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/OHCA
git_branch: devel
git_last_commit: bde7569
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
Date/Publication: 2026-01-30
NeedsCompilation: no
Packaged: 2026-01-30 15:44:48 UTC; biocbuild
Author: Jacques Serizay [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-4295-0624>)
Maintainer: Jacques Serizay <jacquesserizay@gmail.com>
