Package: transformGamPoi
Type: Package
Title: Variance Stabilizing Transformation for Gamma-Poisson Models
Version: 1.17.0
Authors@R: person("Constantin", "Ahlmann-Eltze", email = "artjom31415@googlemail.com", 
               role = c("aut", "cre"), comment = c(ORCID = "0000-0002-3762-068X"))
Description: Variance-stabilizing transformations help with the analysis of 
  heteroskedastic data (i.e., data where the variance is not constant, like count data).
  This package provide two types of variance stabilizing transformations: (1) methods based on the
  delta method (e.g., 'acosh', 'log(x+1)'), (2) model residual based (Pearson and randomized 
  quantile residuals).
BugReports: https://github.com/const-ae/transformGamPoi/issues
URL: https://github.com/const-ae/transformGamPoi
License: GPL-3
Encoding: UTF-8
Imports:
    glmGamPoi,
    DelayedArray,
    Matrix,
    MatrixGenerics,
    SummarizedExperiment,
    HDF5Array,
    methods,
    utils,
    Rcpp
Suggests: 
    testthat,
    TENxPBMCData,
    scran,
    knitr,
    rmarkdown,
    BiocStyle
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Config/testthat/edition: 3
biocViews: SingleCell, Normalization, Preprocessing, Regression
VignetteBuilder: knitr
LinkingTo: 
    Rcpp
git_url: https://git.bioconductor.org/packages/transformGamPoi
git_branch: devel
git_last_commit: 7ddcbe2
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
