Package: selectKSigs
Type: Package
Title: Selecting the number of mutational signatures using a perplexity-based 
    measure and cross-validation 
Depends: R(>= 3.6)
Imports: HiLDA, magrittr, gtools, methods, Rcpp
Suggests: knitr, rmarkdown, testthat, BiocStyle, ggplot2, dplyr, tidyr
Version: 1.23.0
Date: 2021-10-18
Authors@R: c(person("Zhi", "Yang", email = "zyang895@gmail.com", 
             role = c("aut", "cre")),
             person("Yuichi", "Shiraishi", email = "friend1ws@gmail.com", 
             role = "ctb"))
Description: A package to suggest the number of mutational signatures in a 
    collection of somatic mutations using calculating the cross-validated 
    perplexity score. 
URL: https://github.com/USCbiostats/selectKSigs
BugReports: https://github.com/USCbiostats/HiLDA/selectKSigs
License: GPL-3
biocViews: Software, SomaticMutation, Sequencing, StatisticalMethod, Clustering
RoxygenNote: 7.1.2
LinkingTo: Rcpp
VignetteBuilder: knitr
Encoding: UTF-8
git_url: https://git.bioconductor.org/packages/selectKSigs
git_branch: devel
git_last_commit: 3098545
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
