Package: sechm
Type: Package
Title: sechm: Complex Heatmaps from a SummarizedExperiment
Version: 1.19.0
Authors@R: person("Pierre-Luc", "Germain", email="pierre-luc.germain@hest.ethz.ch", role=c("cre","aut"), comment=c(ORCID="0000-0003-3418-4218"))
Description:
    sechm provides a simple interface between SummarizedExperiment objects and the ComplexHeatmap package.
    It enables plotting annotated heatmaps from SE objects, with easy access to rowData and colData columns, 
    and implements a number of features to make the generation of heatmaps easier and more flexible.
    These functionalities used to be part of the SEtools package.
Depends:
    R (>= 4.0),
    SummarizedExperiment,
    ComplexHeatmap
Imports:
    S4Vectors,
    seriation,
    circlize,
    methods,
    randomcoloR,
    stats,
    grid,
    grDevices,
    matrixStats
Suggests:
    BiocStyle,
    knitr,
    rmarkdown
biocViews: GeneExpression, Visualization
VignetteBuilder: knitr 
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.2.3
BugReports: https://github.com/plger/sechm
git_url: https://git.bioconductor.org/packages/sechm
git_branch: devel
git_last_commit: 80bb3d7
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
