Package: scds
Type: Package
Title: In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data
Version: 1.27.0
Authors@R: c(person("Dennis", "Kostka", role=c("aut", "cre"),
        email="kostka@pitt.edu"), person("Bais", "Abha",
        role=c("aut"), email="abhabais@pitt.edu"))
Description: In single cell RNA sequencing (scRNA-seq) data combinations of cells are sometimes considered a single cell (doublets). The scds package provides methods to annotate doublets in scRNA-seq data computationally.
License: MIT + file LICENSE
Encoding: UTF-8
biocViews: SingleCell, RNASeq, QualityControl, Preprocessing,
        Transcriptomics, GeneExpression, Sequencing, Software, Classification
RoxygenNote: 6.1.1
Depends: R (>= 3.6.0)
Imports:
    Matrix,
    S4Vectors,
    SingleCellExperiment,
    SummarizedExperiment,
    xgboost,
    methods,
    stats,
    dplyr,
    pROC
Suggests: BiocStyle, knitr, rsvd, Rtsne, scater, cowplot, rmarkdown
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/scds
git_branch: devel
git_last_commit: e3ed254
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
