Package: scReClassify
Type: Package
Title: scReClassify: post hoc cell type classification of single-cell RNA-seq data
Version: 1.17.0
Authors@R: c(
    person("Pengyi", "Yang", email = "pengyi.yang@sydney.edu.au", 
    role = c("aut"), comment = c(ORCID = "0000-0003-1098-3138")),
    person("Taiyun", "Kim", email = "taiyun.kim91@gmail.com", 
    role = c("aut", "cre"), comment = c(ORCID = "0000-0002-5028-836X")))
Description: A post hoc cell type classification tool to fine-tune cell type 
    annotations generated by any cell type classification procedure with 
    semi-supervised learning algorithm AdaSampling technique. 
    The current version of scReClassify supports Support Vector Machine and 
    Random Forest as a base classifier.
License: GPL-3 + file LICENSE
BugReports: https://github.com/SydneyBioX/scReClassify/issues
URL: https://github.com/SydneyBioX/scReClassify, http://www.bioconductor.org/packages/release/bioc/html/scReClassify.html
Depends: R (>= 4.1)
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.2.1
Roxygen: list(markdown = TRUE)
Imports:
    randomForest,
    e1071,
    stats,
    SummarizedExperiment,
    SingleCellExperiment,
    methods
VignetteBuilder: knitr
biocViews: Software, Transcriptomics, SingleCell, Classification, SupportVectorMachine
Suggests:
    testthat,
    knitr,
    BiocStyle,
    rmarkdown,
    DT,
    mclust,
    dplyr
git_url: https://git.bioconductor.org/packages/scReClassify
git_branch: devel
git_last_commit: e44cea1
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
