Package: receptLoss
Type: Package
Title: Unsupervised Identification of Genes with Expression Loss in Subsets of Tumors
Version: 1.23.0
Author: Daniel Pique, John Greally, Jessica Mar
Maintainer: Daniel Pique <daniel.pique@med.einstein.yu.edu>
Description: receptLoss identifies genes whose expression is lost 
    in subsets of tumors relative to normal tissue. 
    It is particularly well-suited in cases where the 
    number of normal tissue samples is small, as the distribution
    of gene expression in normal tissue samples is approximated by a 
    Gaussian. Originally designed
    for identifying nuclear hormone receptor expression loss but 
    can be applied transcriptome wide as well.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6.0)
RoxygenNote: 7.1.0
Imports: 
    dplyr,
    ggplot2,
    magrittr,
    tidyr,
    SummarizedExperiment
Suggests: 
    knitr,
    rmarkdown,
    testthat (>= 2.1.0),
    here
VignetteBuilder: knitr
biocViews: GeneExpression, StatisticalMethod 
git_url: https://git.bioconductor.org/packages/receptLoss
git_branch: devel
git_last_commit: 2111967
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
