# Homepage
docs

# Extra material related but not to be included in the package
inst/extras
inst/extras/*
inst/extras/..Rcheck
inst/extras/archive
inst/extras/microbiome.Rcheck
inst/extras/*
inst/extras/homepage
inst/extras/.*
inst/extras/.RData
inst/extras/legacy
inst/extras/travis-tool.sh
inst/extras/*.tar.gz
inst/win-install*

# R folder
R/.RData
R/*~

# Vignette sources
vignettes/*_files
vignettes/F1000
vignettes/*_cache
vignettes/pics
vignettes/Example_cache
vignettes/Example_files
vignettes/cache
vignettes/figure
vignettes/.RData
vignettes/*.R
vignettes/*.RData
vignettes/misc*
vignettes/tmp*
vignettes/*~
vignettes/*.pdf
vignettes/*.md
vignettes/*.html

# Git related
.git*

# Travis scripts
README.Rmd
.travis.yml
.push_gh_pages.sh
.push_to_master.sh
.deploy.sh

# Misc
.*~
^.*\.Rproj$
^\.Rproj\.user$
OAtoken
^\.github$
