Package: microbiomeDASim
Type: Package
Title: Microbiome Differential Abundance Simulation 
Version: 1.25.0
Author: Justin Williams, Hector Corrada Bravo, Jennifer Tom, Joseph Nathaniel Paulson
Maintainer: Justin Williams <williazo@ucla.edu>
Description: A toolkit for simulating differential microbiome data designed for
    longitudinal analyses. Several functional forms may be specified for the
    mean trend. Observations are drawn from a multivariate normal model. The objective of this
    package is to be able to simulate data in order to accurately compare different longitudinal
    methods for differential abundance.
License: MIT + file LICENSE
Imports:
    graphics, 
    ggplot2,
    MASS,
    tmvtnorm,
    Matrix,
    mvtnorm,
    pbapply,
    stats,
    phyloseq,
    metagenomeSeq,
    Biobase
Depends: 
    R (>= 3.6.0)
Encoding: UTF-8
LazyData: false
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.0.2
Suggests: 
    testthat (>= 2.1.0),
    knitr,
    devtools
VignetteBuilder: knitr
biocViews: Microbiome,
    Visualization,
    Software
BugReports: https://github.com/williazo/microbiomeDASim/issues
URL: https://github.com/williazo/microbiomeDASim
git_url: https://git.bioconductor.org/packages/microbiomeDASim
git_branch: devel
git_last_commit: 5e863d9
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
