Package: iSEEtree
Version: 1.5.0
Authors@R: 
    c(person(given = "Giulio", family = "Benedetti", role = c("aut", "cre"),
           email = "giulio.benedetti@utu.fi",
           comment = c(ORCID = "0000-0002-8732-7692")),
      person(given = "Ely", family = "Seraidarian", role = c("ctb"),
             email = "ely.seraidarian@utu.fi",
             comment = c(ORCID = "0009-0008-8602-093X")),
      person(given = "Leo", family = "Lahti", role = c("aut"),
             email = "leo.lahti@iki.fi",
             comment = c(ORCID = "0000-0001-5537-637X")))
Title: Interactive visualisation for microbiome data
Description:
    iSEEtree is an extension of iSEE for the TreeSummarizedExperiment data
    container. It provides interactive panel designs to explore hierarchical
    datasets, such as the microbiome and cell lines.
biocViews: Software, Visualization, Microbiome, GUI, ShinyApps, DataImport
License: Artistic-2.0
Encoding: UTF-8
Depends:
    R (>= 4.4.0),
    iSEE (>= 2.19.4)
Imports:
    ape,
    ggplot2,
    ggtree,
    grDevices,
    methods,
    miaViz,
    purrr,
    S4Vectors,
    shiny,
    mia,
    shinyWidgets,
    SingleCellExperiment,
    SummarizedExperiment,
    tidygraph,
    TreeSummarizedExperiment,
    utils
Suggests:
    biomformat,
    BiocStyle,
    knitr,
    RefManageR,
    remotes,
    rmarkdown,
    scater,
    testthat (>= 3.0.0),
    vegan
URL: https://github.com/microbiome/iSEEtree
BugReports: https://github.com/microbiome/iSEEtree/issues
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/iSEEtree
git_branch: devel
git_last_commit: 63da959
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
