Package: hca
Title: Exploring the Human Cell Atlas Data Coordinating Platform
Version: 1.19.0
Authors@R:
    c(person(given = "Maya", family = "McDaniel", role = "aut"),
      person(given = "Martin",
           family = "Morgan",
           role = c("aut", "cre"),
           email = "martin.morgan@roswellpark.org",
           comment = c(ORCID = "0000-0002-5874-8148")
      ),
      person(given = "Kayla", family = "Interdonato", role = "ctb")
    )
Description: This package provides users with the ability to query the
    Human Cell Atlas data repository for single-cell experiment
    data. The `projects()`, `files()`, `samples()` and `bundles()`
    functions retrieve summary information on each of these indexes;
    corresponding `*_details()` are available for individual entries
    of each index. File-based resources can be downloaded using
    `files_download()`. Advanced use of the package allows the user to
    page through large result sets, and to flexibly query the
    'list-of-lists' structure representing query responses.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: R (>= 4.1)
Imports:
    httr,
    jsonlite,
    dplyr,
    tibble,
    tidyr,
    readr,
    BiocFileCache,
    tools,
    utils,
    digest,
    shiny,
    miniUI,
    DT
Suggests:
    LoomExperiment,
    SummarizedExperiment,
    SingleCellExperiment,
    S4Vectors,
    methods,
    testthat (>= 3.0.0),
    knitr,
    rmarkdown,
    BiocStyle
Config/testthat/edition: 3
VignetteBuilder: knitr
biocViews: Software, SingleCell
git_url: https://git.bioconductor.org/packages/hca
git_branch: devel
git_last_commit: dfd1518
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
