Package: groHMM
Version: 1.45.0
Date: 2025-07-24
Title: GRO-seq Analysis Pipeline
Authors@R: c(person("Charles G.", "Danko", role = c("aut"),
                email="dankoc@gmail.com"),
            person("Minho", "Chae", role = c("aut"),
                email="minho.chae@gmail.com"),
            person("Andre", "Martins", role = c("ctb"),
                email="alm253@cornell.edu"),
            person("W. Lee", "Kraus", role = c("aut", "fnd"),
                email="lee.kraus@utsouthwestern.edu"),
	    person("Anusha", "Nagari", role = c("ctb"),
                email="anusha.nagari@utsouthwestern.edu"),
	    person("Tulip", "Nandu", role = c("cre", "ctb"),
                email="tulip.nandu@utsouthwestern.edu"),
	    person("Pariksheet", "Nanda", role = c("ctb"),
                email="pan79@pitt.edu",
		comment = c(ORCID = "0000-0001-9726-4552")))
Depends:
    R (>= 3.0.2), MASS,
    parallel,
    S4Vectors (>= 0.17.25),
    IRanges (>= 2.13.12),
    Seqinfo,
    GenomicRanges (>= 1.31.8),
    GenomicAlignments (>= 1.15.6),
    rtracklayer (>= 1.39.7)
Suggests:
    BiocStyle,
    GenomicFeatures,
    edgeR,
    org.Hs.eg.db,
    TxDb.Hsapiens.UCSC.hg19.knownGene
Description: A pipeline for the analysis of GRO-seq data.
URL: https://github.com/Kraus-Lab/groHMM
BugReports: https://github.com/Kraus-Lab/groHMM/issues
License: GPL-3
biocViews: Sequencing, Software
LazyLoad: yes
RoxygenNote: 7.3.2
git_url: https://git.bioconductor.org/packages/groHMM
git_branch: devel
git_last_commit: a2e7235
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
