Compute logicle transformation from the flowData associated with a GatingHierarchy

See details in estimateLogicle

See details in ?flowCore::estimateLogicle

# S3 method for GatingHierarchy
estimateLogicle(x, channels, ...)

# S3 method for GatingHierarchy
estimateLogicle(x, channels, ...)

Arguments

x	a GatingHierarchy
channels	channels or markers for which the logicle transformation is to be estimated.
...	other arguments
x	a GatingHierarchy
channels	channels or markers for which the logicle transformation is to be estimated.
...	other arguments

Value

transformerList object

transformerList object

Examples

if (FALSE) {
 # gs is a GatingSet
 trans.list <- estimateLogicle(gs[[1]], c("CD3", "CD4", "CD8"))
 # trans.list is a transformerList that can be directly applied to GatinigSet
 gs <- transform(gs, trans.list)
}
if (FALSE) {
 # gs is a GatingSet
 trans.list <- estimateLogicle(gs[[1]], c("CD3", "CD4", "CD8"))
 # trans.list is a transformerList that can be directly applied to GatinigSet
 gs <- transform(gs, trans.list)
}