^Meta$
^doc$
#----------------------------
# Git and SVN related
^.svn
^.git
^/\.gitattributes$
README[.]md

# Travis-CI et al.
^[.]travis[.]yml$
^travis-tool[.]sh$
^pkg-build[.]sh$
^appveyor[.]yml$
^covr-utils.R$
^[.]coveralls[.]R$
# R related
^cran-comments[.].*$
^vignettes/.*[.](pdf|PDF)$
^vignettes/.*[.](r|R)$
^vignettes/.*[.](html|HTML)$
^vignettes/[.]install_extras$
^Makefile$
^incl
^NAMESPACE,.*[.]txt$
^nohup.*$
^[.]devel
^[.]test
^[.]check
^.*\.Rproj$
^\.Rproj\.user$
# DESCan2
^vignettes/DEScan2_cache
vignettes/coverage.html
# CPP builded
src/*\.o
# Other
testData
^config\.status
^config\.log
tests/testthat/pipeline\.R
