Package: bugsigdbr
Version: 1.17.0
Title: R-side access to published microbial signatures from BugSigDB
Authors@R: c(
    person(given = "Ludwig",
           family = "Geistlinger",
           role = c("aut", "cre"),
           email = "ludwig.geistlinger@gmail.com"),
    person(given = "Jennifer",
           family = "Wokaty",
           role = "aut",
           email = "jennifer.wokaty@sph.cuny.edu"),
    person(given = "Levi",
           family = "Waldron",
           role = "aut",
           email = "lwaldron.research@gmail.com"))
Description:
    The bugsigdbr package implements convenient access to bugsigdb.org 
    from within R/Bioconductor. The goal of the package is to facilitate import of 
    BugSigDB data into R/Bioconductor, provide utilities for extracting microbe
    signatures, and enable export of the extracted signatures to plain text files
    in standard file formats such as GMT.
URL: https://github.com/waldronlab/bugsigdbr
BugReports: https://github.com/waldronlab/bugsigdbr/issues
Depends: R (>= 4.1)
Imports:
    BiocFileCache,
    methods,
    vroom,
    utils
Suggests:
    BiocStyle,
    knitr,
    ontologyIndex,
    rmarkdown,
    testthat (>= 3.0.0)
License: GPL-3
VignetteBuilder: knitr
biocViews: DataImport, GeneSetEnrichment, Metagenomics, Microbiome
Encoding: UTF-8
RoxygenNote: 7.3.2
git_url: https://git.bioconductor.org/packages/bugsigdbr
git_branch: devel
git_last_commit: 5a6fb55
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
