Package: bedbaser
Title: A BEDbase client
Version: 1.3.0
Authors@R: c(
    person(
        given = "Andres",
        family = "Wokaty",
        role = c("aut", "cre"),
        email = "jennifer.wokaty@sph.cuny.edu",
        comment = c(ORCID = "0009-0008-0900-8793")
    ),
    person(
        given = "Levi",
        family = "Waldron",
        role = c("aut"),
        email = "levi.waldron@sph.cuny.edu",
        comment = c(ORCID = "0000-0003-2725-0694")
    ))
Description: A client for BEDbase. bedbaser provides access to the API at
    api.bedbase.org. It also includes convenience functions to import BED files
    into GRanges objects and BEDsets into GRangesLists.
URL: https://github.com/waldronlab/bedbaser
BugReports: https://github.com/waldronlab/bedbaser/issues
biocViews: Software, DataImport, ThirdPartyClient
License: Artistic License 2.0
Depends:
    R (>= 4.5.0)
Imports:
    AnVIL (>= 1.16.0),
    BiocFileCache,
    dplyr,
    GenomeInfoDb,
    GenomicRanges,
    httr,
    methods,
    purrr,
    rtracklayer,
    rlang,
    R.utils,
    stats,
    stringr,
    tibble,
    tidyr,
    tools,
    utils
Suggests:
    BiocStyle,
    knitr,
    liftOver,
    testthat (>= 3.0.0)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/bedbaser
git_branch: devel
git_last_commit: c5c189a
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
