Package: affycoretools
Date: 2008-12-15
Title: Functions useful for those doing repetitive analyses
    with Affymetrix GeneChips
Version: 1.83.0
Author: James W. MacDonald
Description: Various wrapper functions that have been written to
    streamline the more common analyses that a core Biostatistician
    might see.
Maintainer: James W. MacDonald <jmacdon@u.washington.edu>
License: Artistic-2.0
Depends:
    Biobase,
    methods
Imports:
    affy,
    limma,
    GOstats,
    gcrma,
    splines,
    xtable,
    AnnotationDbi,
    ggplot2,
    gplots,
    oligoClasses,
    ReportingTools,
    hwriter,
    lattice,
    S4Vectors,
    edgeR,
    RSQLite,
    BiocGenerics,
    DBI,
    Glimma
Suggests:
    affydata,
    hgfocuscdf,
    BiocStyle,
    knitr,
    hgu95av2.db,
    rgl,
    rmarkdown
biocViews: ReportWriting, Microarray, OneChannel, GeneExpression
VignetteBuilder: knitr
RoxygenNote: 7.1.2
git_url: https://git.bioconductor.org/packages/affycoretools
git_branch: devel
git_last_commit: c6a0b37
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
