Package: TPP
Type: Package
Title: Analyze thermal proteome profiling (TPP) experiments
Version: 3.39.0
Author: Dorothee Childs, Nils Kurzawa, Holger Franken, Carola Doce, Mikhail Savitski and Wolfgang Huber
Maintainer: Dorothee Childs <d.childs@posteo.de>
Depends:
    R (>= 3.4),
    Biobase,
    dplyr,
    magrittr,
    tidyr
Imports:
    biobroom,
    broom,
    data.table,
    doParallel,
    foreach,
    futile.logger,
    ggplot2,
    grDevices, 
    gridExtra,
    grid,
    knitr,
    limma,
    MASS,
    mefa,
    nls2,
    openxlsx (>= 2.4.0),
    parallel,
    plyr,
    purrr,
    RColorBrewer,
    RCurl,
    reshape2,
    rmarkdown,
    splines,
    stats,
    stringr,
    tibble,
    utils,
    VennDiagram,
    VGAM
Suggests:
    BiocStyle,
    testthat
Description: Analyze thermal proteome profiling (TPP) experiments with varying
    temperatures (TR) or compound concentrations (CCR).
License: Artistic-2.0
VignetteBuilder: knitr
biocViews: ImmunoOncology, Proteomics, MassSpectrometry
git_url: https://git.bioconductor.org/packages/TPP
git_branch: devel
git_last_commit: e52a5e5
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
