Package: TCseq
Type: Package
Title: Time course sequencing data analysis
Version: 1.35.0
Author: Mengjun Wu <minervajunjun@gmail.com>, Lei Gu <leigu@broadinstitute.org>
Maintainer: Mengjun Wu <minervajunjun@gmail.com>
Description: Quantitative and differential analysis of epigenomic and
    transcriptomic time course sequencing data, clustering analysis
    and visualization of the temporal patterns of time course data.
Depends: R (>= 3.4)
License: GPL (>= 2)
LazyData: TRUE
Imports: edgeR, BiocGenerics, reshape2, GenomicRanges, IRanges,
    SummarizedExperiment, GenomicAlignments, Rsamtools, e1071,
    cluster, ggplot2, grid, grDevices, stats, utils, methods, locfit
Suggests: testthat
biocViews: Epigenetics, TimeCourse, Sequencing, ChIPSeq, RNASeq,
    DifferentialExpression, Clustering, Visualization
RoxygenNote: 7.2.3
git_url: https://git.bioconductor.org/packages/TCseq
git_branch: devel
git_last_commit: 049f241
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
