Package: SMAD
Type: Package
Title: Statistical Modelling of AP-MS Data (SMAD)
Version: 1.27.0
Authors@R: c(
    person("Qingzhou", "Zhang", , "zqzneptune@hotmail.com", c("aut", "cre")))
Description: Assigning probability scores to protein interactions captured in 
    affinity purification mass spectrometry (AP-MS) expriments to infer 
    protein-protein interactions. The output would facilitate non-specific 
    background removal as contaminants are commonly found in AP-MS data.
Depends: 
    R (>= 3.6.0),
    RcppAlgos
Imports: 
    magrittr (>= 1.5),
    dplyr, 
    stats, 
    tidyr,
    utils,
    Rcpp (>= 1.0.0)
LinkingTo: Rcpp
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Suggests: 
    knitr,
    rmarkdown,
    testthat,
    BiocStyle
VignetteBuilder: knitr
biocViews: 
    MassSpectrometry, 
    Proteomics,
    Software
git_url: https://git.bioconductor.org/packages/SMAD
git_branch: devel
git_last_commit: 3337822
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
