Package: Rqc
Type: Package
Title: Quality Control Tool for High-Throughput Sequencing Data
Version: 1.45.0
Author: Welliton Souza, Benilton Carvalho <beniltoncarvalho@gmail.com>
Maintainer: Welliton Souza <well309@gmail.com>
Description: Rqc is an optimised tool designed for quality control and
    assessment of high-throughput sequencing data. It performs parallel
    processing of entire files and produces a report which contains a set
    of high-resolution graphics.
License: GPL (>= 2)
Depends:
    BiocParallel,
    ShortRead,
    ggplot2
Imports:
    BiocGenerics (>= 0.25.1),
    Biostrings,
    IRanges,
    methods,
    S4Vectors,
    knitr (>= 1.7),
    BiocStyle,
    plyr,
    markdown,
    grid,
    reshape2,
    Rcpp (>= 0.11.6),
    biovizBase,
    shiny,
    Rsamtools,
    GenomicAlignments,
    GenomicFiles
LinkingTo: Rcpp
Suggests:
    rmarkdown,
    testthat
VignetteBuilder: knitr
biocViews: Sequencing, QualityControl, DataImport
URL: https://github.com/labbcb/Rqc
BugReports: https://github.com/labbcb/Rqc/issues
RoxygenNote: 7.1.1
Encoding: UTF-8
git_url: https://git.bioconductor.org/packages/Rqc
git_branch: devel
git_last_commit: 81cf3fd
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
