Package: RcwlPipelines
Title: Bioinformatics pipelines based on Rcwl
Version: 1.27.0
Authors@R: 
    c(person(given = "Qiang", family = "Hu",
             role = c("aut", "cre"),
             email = "qiang.hu@roswellpark.org"),
      person(given = "Qian", family = "Liu",
             role = c("aut"),
             email = "qian.liu@roswellpark.org"),
      person(given = "Shuang", family = "Gao",
	     role = c("aut"),
	     email = "shuang.gao@roswellpark.org"))
Description: A collection of Bioinformatics tools and pipelines based on R and the Common Workflow Language.
Depends: R (>= 3.6), Rcwl, BiocFileCache
Imports: rappdirs, methods, utils, git2r, httr, S4Vectors
License: GPL-2
Encoding: UTF-8
Suggests: 
    testthat,
    knitr,
    rmarkdown,
    BiocStyle
VignetteBuilder: knitr
RoxygenNote: 7.2.3
biocViews: Software, WorkflowStep, Alignment, Preprocessing, QualityControl,
	   DNASeq, RNASeq, DataImport, ImmunoOncology
SystemRequirements: nodejs
git_url: https://git.bioconductor.org/packages/RcwlPipelines
git_branch: devel
git_last_commit: d418067
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
