Package: MetaNeighbor
Type: Package
Title: Single cell replicability analysis
Version: 1.31.0
Authors@R: c(person("Megan", "Crow", email = "mcrow@cshl.edu",role = c("aut", "cre")),
    person("Sara", "Ballouz", email = "sballouz@cshl.edu",role = c("ctb")),
    person("Manthan", "Shah", email = "shah@cshl.edu",role = c("ctb")),
    person("Stephan", "Fischer", email = "fischer@cshl.edu",role = c("ctb")),
    person("Jesse", "Gillis", email = "JGillis@cshl.edu",role = c("aut")))
Description: MetaNeighbor allows users to quantify cell type replicability across 
    datasets using neighbor voting.
biocViews: ImmunoOncology, GeneExpression, GO, MultipleComparison, SingleCell, Transcriptomics
License: MIT + file LICENSE
Depends: R(>= 3.5)
Imports: 
    grDevices,
    graphics,
    methods,
    stats (>= 3.4),
    utils (>= 3.4),
    Matrix (>= 1.2),
    matrixStats (>= 0.54),
    beanplot (>= 1.2),
    gplots (>= 3.0.1),
    RColorBrewer (>= 1.1.2),
    SummarizedExperiment (>= 1.12),
    SingleCellExperiment,
    igraph,
    dplyr,
    tidyr,
    tibble,
    ggplot2
Suggests: 
    knitr (>= 1.17),
    rmarkdown (>= 1.6),
    testthat (>= 1.0.2),
    UpSetR
LazyData: true
RoxygenNote: 7.1.1
VignetteBuilder: knitr
Maintainer: Stephan Fischer <fischer@cshl.edu>
git_url: https://git.bioconductor.org/packages/MetaNeighbor
git_branch: devel
git_last_commit: 29fdbe5
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
