Package: MSPrep
Title:
  Package for Summarizing, Filtering, Imputing, and Normalizing Metabolomics 
  Data
Version: 1.21.0
Authors@R:
  c(person("Max", "McGrath",
           email = "max.mcgrath@ucdenver.edu",
           role = c("aut", "cre")),
    person("Matt", "Mulvahill",
           email = "matt.mulvahill@gmail.com",
           role = c("aut")),
    person("Grant", "Hughes",
           email = "",
           role = c("aut")),
    person("Sean", "Jacobson", 
           email = "jacobsonseanr@gmail.com",
           role = c("aut")),
    person("Harrison", "Pielke-lombardo",
           email = "harrison.pielke-lombardo@cuanschutz.edu",
           role = c("aut")),
    person("Katerina", "Kechris",
           email = "Katerina.Kechris@cuanschutz.edu",
           role = c("aut", "cph", "ths")))
Description:
  Package performs summarization of replicates, filtering by frequency, several
  different options for imputing missing data, and a variety of options for 
  transforming, batch correcting, and normalizing data.
URL: https://github.com/KechrisLab/MSPrep
BugReports: https://github.com/KechrisLab/MSPrep/issues
Depends:
  R (>= 4.1.0)
Imports:
  SummarizedExperiment,
  S4Vectors,
  pcaMethods (>= 1.24.0),
  crmn,
  preprocessCore,
  dplyr (>= 0.7),
  tidyr,
  tibble (>= 1.2),
  magrittr,
  rlang,
  stats,
  stringr,
  methods,
  missForest,
  sva,
  VIM,
Suggests:
  BiocStyle,
  knitr,
  rmarkdown,
  testthat (>= 1.0.2)
VignetteBuilder: knitr
LazyData: false
NeedsCompilation: no
License: GPL-3
biocViews: Metabolomics,
  MassSpectrometry,
  Preprocessing
Encoding: UTF-8
RoxygenNote: 7.1.2
git_url: https://git.bioconductor.org/packages/MSPrep
git_branch: devel
git_last_commit: e2ae0eb
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
