Package: MOMA
Title: Multi Omic Master Regulator Analysis
Version: 1.23.0
Authors@R: c(person("Evan","Paull",email="evanpaull@gmail.com", role=c("aut")), 
              person("Sunny", "Jones", email = "sunnyjjones@gmail.com", 
              role = c("aut", "cre")), person("Mariano", "Alvarez", 
              email = "reef103@gmail.com", role = c("aut")))
Description: This package implements the inference of candidate master regulator
  proteins from multi-omics' data (MOMA) algorithm, 
  as well as ancillary analysis and visualization functions. 
Depends: R (>= 4.0)
License: GPL-3
Encoding: UTF-8
LazyData: true
BugReports: https://github.com/califano-lab/MOMA/issues
RoxygenNote: 7.1.0
biocViews: Software, NetworkEnrichment, NetworkInference, Network, 
  FeatureExtraction, Clustering, FunctionalGenomics, Transcriptomics, 
  SystemsBiology
Imports:
  circlize,
	cluster,
	ComplexHeatmap,
	dplyr,
	ggplot2,
	graphics,
	grid,
	grDevices,
	magrittr,
	methods,
	MKmisc,
	MultiAssayExperiment,
	parallel,
	qvalue,
	RColorBrewer,
	readr,
	reshape2,
	rlang,
	stats,
	stringr,
	tibble,
	tidyr,
	utils
Suggests: 
  BiocStyle,
  knitr,
  rmarkdown,
  testthat,
  viper
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/MOMA
git_branch: devel
git_last_commit: 099cb9e
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
