Plot boxplots of self interaction ratios.

Plots the boxplots of self interaction ratios, which are the differences between self interaction and median of other interactions for each genomic position. Since the A compartment is open with more interactions overall, it is assumed that self interaction ratios in compartment A are smaller than in compartment B.

plotSelfInteractionRatios(object, chromosome)

Arguments

object	A HiCDOCDataSet.
chromosome	A chromosome name or index in chromosomes(object).

Value

A ggplot.

Examples

data(exampleHiCDOCDataSetProcessed)
plotSelfInteractionRatios(exampleHiCDOCDataSetProcessed, chromosome = 1)