Package: ERSSA
Type: Package
Title: Empirical RNA-seq Sample Size Analysis
Version: 1.29.0
Date: 2020-01-21
Author: Zixuan Shao [aut, cre]
Maintainer: Zixuan Shao <Zixuanshao.zach@gmail.com>
Description: The ERSSA package takes user supplied RNA-seq differential expression 
	dataset and calculates the number of differentially expressed genes at varying 
	biological replicate levels. This allows the user to determine, without relying on
	any a priori assumptions, whether sufficient differential detection has been acheived 
	with their RNA-seq dataset.
Depends: R (>= 4.0.0)
Imports: 
	edgeR (>= 3.23.3),
	DESeq2 (>= 1.21.16),
	ggplot2 (>= 3.0.0),
	RColorBrewer (>= 1.1-2),
	plyr (>= 1.8.4),
	BiocParallel (>= 1.15.8),
	apeglm (>= 1.4.2),
	grDevices,
	stats,
	utils
Suggests: BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
biocViews: ImmunoOncology, GeneExpression, Transcription, DifferentialExpression, RNASeq, MultipleComparison, QualityControl
License: GPL-3 | file LICENSE
Encoding: UTF-8
LazyData: true
URL: https://github.com/zshao1/ERSSA
RoxygenNote: 7.0.2
git_url: https://git.bioconductor.org/packages/ERSSA
git_branch: devel
git_last_commit: 0abfd23
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
