Preprocess scExp - TF-IDF
preprocess_TFIDF(scExp, scale = 10000, log = TRUE)
| scExp | A SingleCellExperiment Object |
|---|---|
| scale | A numeric to multiply the matrix in order to have human readeable numbers. Has no impact on the downstream analysis |
| log | Wether to use neperian log on the TF-IDF normalized data or not. |
A SingleCellExperiment object.
#>#> 6 x 300 sparse Matrix of class "dgCMatrix"#>#> #> chr1_1_5147117 0.6454577 . 0.9326427 2.149169 . . #> chr1_5147118_10294233 0.6479475 . . . 0.9604923 0.6403129 #> chr1_10294234_15441350 0.6390228 . . . . . #> chr1_15441351_20588466 . 0.6892 . 5.446382 . . #> chr1_20588467_25735583 . . . . 5.5796039 . #> chr1_25735584_30882699 . . 1.2018330 . . . #> #> chr1_1_5147117 . . 5.9231053 . . #> chr1_5147118_10294233 . 5.4409513 . 5.0339323 . #> chr1_10294234_15441350 1.314746 . . 0.5880648 . #> chr1_15441351_20588466 . . . . 0.5482618 #> chr1_20588467_25735583 . . . . 0.5515136 #> chr1_25735584_30882699 . 0.9989993 0.6368258 . . #> #> chr1_1_5147117 . 0.7767769 4.71169 6.0902083 . . #> chr1_5147118_10294233 0.7159710 0.7796041 . 1.0510309 . . #> chr1_10294234_15441350 0.7063995 . . 0.6486552 6.142942 . #> chr1_15441351_20588466 0.7156500 1.2118622 . . 1.147317 1.1215917 #> chr1_20588467_25735583 . . . . . 0.7143482 #> chr1_25735584_30882699 . 0.7801318 . . . 1.6382414 #> #> chr1_1_5147117 . 0.5438332 1.338145 . . #> chr1_5147118_10294233 5.3231348 . . 0.6286622 0.6929918 #> chr1_10294234_15441350 4.8593562 4.3924640 . . . #> chr1_15441351_20588466 0.9051020 . . . 4.8510988 #> chr1_20588467_25735583 0.5549034 0.5490061 . 0.6319631 0.6965274 #> chr1_25735584_30882699 0.5523164 0.5464398 . 1.0122942 . #> #> chr1_1_5147117 . . . . 0.7033083 #> chr1_5147118_10294233 0.9555762 1.2391770 . 5.631185 . #> chr1_10294234_15441350 0.9440440 . . . . #> chr1_15441351_20588466 0.5875544 . 1.885418 . . #> chr1_20588467_25735583 0.5909774 0.6006934 1.056892 . . #> chr1_25735584_30882699 . . 1.554358 . . #> #> chr1_1_5147117 . 0.6574078 0.5793766 . . #> chr1_5147118_10294233 1.3500233 . 4.2877521 . 1.8275519 #> chr1_10294234_15441350 . . . . 0.6171129 #> chr1_15441351_20588466 . 1.3355829 . . . #> chr1_20588467_25735583 0.6725635 . . . . #> chr1_25735584_30882699 . . . 4.977266 5.1352141 #> #> chr1_1_5147117 3.378662 . . 1.2344523 . #> chr1_5147118_10294233 . . 0.6570821 0.7995923 . #> chr1_10294234_15441350 . 5.4559223 . . . #> chr1_15441351_20588466 . . 1.0498223 . 0.9912824 #> chr1_20588467_25735583 . . 0.6604885 . . #> chr1_25735584_30882699 0.622656 0.7861673 . . 4.9184650 #> #> chr1_1_5147117 . 0.9548784 5.867053 1.008140 . . #> chr1_5147118_10294233 0.6465528 . . . . 0.6771660 #> chr1_10294234_15441350 5.3067971 0.5813206 . 2.990079 4.905074 . #> chr1_15441351_20588466 . 2.8825694 . . . 0.6768571 #> chr1_20588467_25735583 0.6499206 . 5.451107 . 5.226880 . #> chr1_25735584_30882699 0.6470170 . . . . 4.5123850 #> #> chr1_1_5147117 . . 0.5817491 . 1.0914751 #> chr1_5147118_10294233 5.1261030 5.372219 . . 1.0949511 #> chr1_10294234_15441350 . . . . . #> chr1_15441351_20588466 5.8597759 . . . 0.6900895 #> chr1_20588467_25735583 . . . 1.470498 . #> chr1_25735584_30882699 0.9226881 . 0.9509435 4.420843 0.6908886 #> #> chr1_1_5147117 0.6541035 0.7095382 1.3107359 . . #> chr1_5147118_10294233 . . . . . #> chr1_10294234_15441350 0.6476073 . 0.6369942 0.5654358 4.923271 #> chr1_15441351_20588466 1.0491945 . . . 4.914119 #> chr1_20588467_25735583 . . 0.6492640 5.6161441 . #> chr1_25735584_30882699 0.6570862 5.6370017 . 0.5740273 . #> #> chr1_1_5147117 . . . . . #> chr1_5147118_10294233 0.6197570 . . 0.8761927 0.6811998 #> chr1_10294234_15441350 . 1.024009 . 0.5234324 1.0702530 #> chr1_15441351_20588466 0.6194670 . . . 5.0934762 #> chr1_20588467_25735583 . 4.557043 0.6815053 0.8803191 . #> chr1_25735584_30882699 0.6202073 . . . 1.9261732 #> #> chr1_1_5147117 . 0.6826478 0.6448024 0.9592931 5.4037984 #> chr1_5147118_10294233 4.182455 . . . . #> chr1_10294234_15441350 . . . . . #> chr1_15441351_20588466 0.526737 . 3.9502435 . 0.7075548 #> chr1_20588467_25735583 . 0.6887458 0.6506609 . . #> chr1_25735584_30882699 . 1.5975299 . . . #> #> chr1_1_5147117 . . . . . . #> chr1_5147118_10294233 . 0.6811086 0.5454522 5.294664 . . #> chr1_10294234_15441350 3.924003 . 0.5375884 1.236164 . 3.431059 #> chr1_15441351_20588466 . 0.6807985 0.5451882 4.882742 . . #> chr1_20588467_25735583 . 4.7014894 5.5978076 . . 1.013015 #> chr1_25735584_30882699 . . 0.5458620 . . . #> #> chr1_1_5147117 . . . 0.5880390 . #> chr1_5147118_10294233 . 0.6403129 0.7531384 . 5.777258 #> chr1_10294234_15441350 . . . . . #> chr1_15441351_20588466 . . 5.3780811 0.5900868 . #> chr1_20588467_25735583 0.5566891 . . 0.5935207 . #> chr1_25735584_30882699 . 0.6407739 . . . #> #> chr1_1_5147117 . 4.8482951 1.0201673 1.324182 . . #> chr1_5147118_10294233 . . . 0.654679 . . #> chr1_10294234_15441350 1.468455 0.5407739 0.6285386 . . . #> chr1_15441351_20588466 . 0.5484076 . . 0.6882662 . #> chr1_20588467_25735583 4.501839 4.6449540 0.6406921 1.885014 . . #> chr1_25735584_30882699 . . . . . . #> #> chr1_1_5147117 . 0.6958469 1.0117262 . . 0.9651365 #> chr1_5147118_10294233 . . 1.0150566 . 6.006732 . #> chr1_10294234_15441350 0.5290022 . . . . 6.0484364 #> chr1_15441351_20588466 . . 0.6308501 . . . #> chr1_20588467_25735583 . . . . . . #> chr1_25735584_30882699 . . . . 1.094599 4.5712263 #> #> chr1_1_5147117 0.7052244 . . . 0.9980059 #> chr1_5147118_10294233 1.1181993 0.894703 5.368424 . 2.4275486 #> chr1_10294234_15441350 0.6983765 1.345294 0.619929 0.5787867 . #> chr1_15441351_20588466 . . . . . #> chr1_20588467_25735583 . . . 0.5902357 . #> chr1_25735584_30882699 0.7083678 . . 0.5875274 0.6215234 #> #> chr1_1_5147117 0.5520555 . . . . . #> chr1_5147118_10294233 1.6945307 . 0.6539658 . 1.8673452 . #> chr1_10294234_15441350 . . 5.6761060 1.1784510 1.5215767 . #> chr1_15441351_20588466 0.5540097 . . 0.5673198 . . #> chr1_20588467_25735583 0.5572869 . . . 0.6514442 . #> chr1_25735584_30882699 . 0.7043881 . . 1.0386769 . #> #> chr1_1_5147117 1.219150 . 0.9568924 . . #> chr1_5147118_10294233 . 0.5163601 0.5911141 0.9324464 0.7335046 #> chr1_10294234_15441350 . 0.5088175 . 4.7785931 . #> chr1_15441351_20588466 1.222393 . . 0.5709089 4.7783147 #> chr1_20588467_25735583 1.227822 . . . 0.7371803 #> chr1_25735584_30882699 6.157893 3.6606916 4.3624792 . . #> #> chr1_1_5147117 . . 3.862075 . 0.6286229 . #> chr1_5147118_10294233 . 1.202279 . . . 0.6642724 #> chr1_10294234_15441350 . . . 0.6026969 3.0375542 5.5858245 #> chr1_15441351_20588466 . . . 0.9874661 0.6307723 . #> chr1_20588467_25735583 4.637249 . . 0.6144889 . . #> chr1_25735584_30882699 . . . . 1.0155720 0.6647455 #> #> chr1_1_5147117 4.4253776 . 0.6327656 . . 0.7311091 #> chr1_5147118_10294233 0.5582096 . 1.0206061 . 1.6747487 2.0146610 #> chr1_10294234_15441350 5.1513560 . . . . . #> chr1_15441351_20588466 . . 1.0202045 . . . #> chr1_20588467_25735583 . . 0.6385460 . . . #> chr1_25735584_30882699 0.9149055 . . 0.6901388 0.7349706 5.3114317 #> #> chr1_1_5147117 . 0.6243443 5.3147461 . . . #> chr1_5147118_10294233 . . . . . 1.537911 #> chr1_10294234_15441350 . . 0.8676071 0.5691625 . . #> chr1_15441351_20588466 4.29056 0.6264832 . . 0.4797089 . #> chr1_20588467_25735583 . . . . . . #> chr1_25735584_30882699 . . 0.5332133 . 1.0472397 . #> #> chr1_1_5147117 0.6102507 . . 0.7547202 0.9291030 #> chr1_5147118_10294233 . 4.3047734 . 0.7574938 0.5710554 #> chr1_10294234_15441350 0.6040709 0.5490138 . . . #> chr1_15441351_20588466 . 0.9122546 1.0022535 2.0532614 0.9318890 #> chr1_20588467_25735583 0.9942065 . . . . #> chr1_25735584_30882699 . . 0.6225048 . . #> #> chr1_1_5147117 . 0.6364072 . . . 4.806034 #> chr1_5147118_10294233 0.7443086 0.6388721 . . . . #> chr1_10294234_15441350 . . . 5.37595 0.6439465 . #> chr1_15441351_20588466 5.1290248 . 1.2217004 . . . #> chr1_20588467_25735583 . . 0.9584352 . . 1.951130 #> chr1_25735584_30882699 0.7448204 . 0.5871920 4.06201 . . #> #> chr1_1_5147117 . . . . 0.5605982 #> chr1_5147118_10294233 . 0.6407545 . 0.6010456 . #> chr1_10294234_15441350 1.222097 4.8089535 . . 0.5547936 #> chr1_15441351_20588466 . 1.0277238 0.6471143 0.9734327 . #> chr1_20588467_25735583 . . . . . #> chr1_25735584_30882699 4.851960 3.0336700 . . . #> #> chr1_1_5147117 . . 0.9259854 0.5775125 1.230036 1.2144330 #> chr1_5147118_10294233 . . . . . . #> chr1_10294234_15441350 0.6742654 . 0.5606996 . . 0.5759466 #> chr1_15441351_20588466 . . 0.9287658 . . . #> chr1_20588467_25735583 . . . . 1.542643 . #> chr1_25735584_30882699 . . . 5.2076991 . . #> #> chr1_1_5147117 1.0108270 . 1.68787 . 0.6122291 . #> chr1_5147118_10294233 . 0.6498856 . . . . #> chr1_10294234_15441350 . . . 4.6857585 0.6060347 . #> chr1_15441351_20588466 . 1.3202191 . 4.4662750 . . #> chr1_20588467_25735583 . . . 0.5508407 . . #> chr1_25735584_30882699 0.6309387 . . 5.3001117 . 1.047448 #> #> chr1_1_5147117 0.6065857 0.7109383 . . 0.7255759 #> chr1_5147118_10294233 0.6089668 . 0.6287394 0.6372394 . #> chr1_10294234_15441350 . 0.7040521 0.6200055 1.0113444 0.7185928 #> chr1_15441351_20588466 0.6086804 5.2866897 . . 2.1395775 #> chr1_20588467_25735583 . . 1.0162780 . . #> chr1_25735584_30882699 . 0.7140991 0.6291944 . 1.4392801 #> #> chr1_1_5147117 4.957806 0.7598081 5.9193169 . 1.3167228 #> chr1_5147118_10294233 . . . 0.6280063 1.0403922 #> chr1_10294234_15441350 1.500604 5.0051037 0.9431666 . . #> chr1_15441351_20588466 5.348776 . 0.9543062 . 0.6495029 #> chr1_20588467_25735583 . . . 0.6313048 . #> chr1_25735584_30882699 . . . . . #> #> chr1_1_5147117 . 0.6037862 . . . . #> chr1_5147118_10294233 1.005813 0.6061593 . 1.096267 0.5836274 . #> chr1_10294234_15441350 1.482431 . . . 4.1946738 3.936863 #> chr1_15441351_20588466 . . 0.7530874 4.766572 0.9493628 1.100957 #> chr1_20588467_25735583 . . 1.4808430 . . . #> chr1_25735584_30882699 . . 5.9378447 4.880276 . 5.510428 #> #> chr1_1_5147117 3.743681 0.657493 0.6642084 . . . #> chr1_5147118_10294233 . . . 1.029766 0.5754304 4.7351885 #> chr1_10294234_15441350 . . 0.6576413 1.017715 . . #> chr1_15441351_20588466 . . 0.6664436 . . 0.6247615 #> chr1_20588467_25735583 1.982998 . 1.0678852 . 5.1776544 . #> chr1_25735584_30882699 0.711845 . . 5.632769 . 0.6255064 #> #> chr1_1_5147117 . . . . . . #> chr1_5147118_10294233 0.8430006 5.896302 . . . . #> chr1_10294234_15441350 0.5003729 1.131369 . . . 2.3419775 #> chr1_15441351_20588466 4.9593924 . . 4.432538 . 0.6716306 #> chr1_20588467_25735583 . . . . 1.14285 0.6753983 #> chr1_25735584_30882699 4.3879725 1.144812 . . . . #> #> chr1_1_5147117 0.6419111 0.6343436 1.1094107 . 0.7371091 #> chr1_5147118_10294233 . 4.6124222 . 5.5123393 . #> chr1_10294234_15441350 0.6355015 . 1.3882264 . . #> chr1_15441351_20588466 0.6440929 . . 0.8470856 5.7705492 #> chr1_20588467_25735583 0.6477509 1.0272850 0.7074694 . . #> chr1_25735584_30882699 . . . 0.8480015 0.7403486 #> #> chr1_1_5147117 1.0175332 . 0.9106006 . . 0.6879862 #> chr1_5147118_10294233 . 1.2520123 . . . 0.6905902 #> chr1_10294234_15441350 0.6266171 . . . . 6.0786851 #> chr1_15441351_20588466 0.6351225 . . . . . #> chr1_20588467_25735583 . 0.9845889 0.9179634 0.7115602 . 0.6941173 #> chr1_25735584_30882699 1.0214982 0.6061010 . . . . #> #> chr1_1_5147117 0.9510628 . . 1.3138792 0.715427 #> chr1_5147118_10294233 0.9542744 . . 1.5361041 . #> chr1_10294234_15441350 0.9427516 5.883024 . . . #> chr1_15441351_20588466 . . 0.9793379 . 1.131324 #> chr1_20588467_25735583 . . . 0.6513204 . #> chr1_25735584_30882699 0.5873262 . . . . #> #> chr1_1_5147117 . . . 0.9638473 . #> chr1_5147118_10294233 . 0.7274915 . . . #> chr1_10294234_15441350 0.5489543 . 0.9784381 . . #> chr1_15441351_20588466 . 0.7271670 . . 0.5710357 #> chr1_20588467_25735583 5.3807045 . . . . #> chr1_25735584_30882699 . . 4.7694068 0.5965962 0.5717332 #> #> chr1_1_5147117 . . . 0.7312153 . #> chr1_5147118_10294233 0.6253588 . . . . #> chr1_10294234_15441350 . 0.7395725 . . . #> chr1_15441351_20588466 . . . . . #> chr1_20588467_25735583 0.6286473 . 0.6959587 5.7392247 . #> chr1_25735584_30882699 . . . 0.7344373 1.840553 #> #> chr1_1_5147117 . . 4.4445891 . . . #> chr1_5147118_10294233 . . . 0.6942703 . . #> chr1_10294234_15441350 0.5712224 0.8801489 1.1151799 5.3353750 . . #> chr1_15441351_20588466 . . 0.7148419 . . 0.5829195 #> chr1_20588467_25735583 0.5825611 0.8953693 0.7187756 . . 1.2214494 #> chr1_25735584_30882699 0.5798789 . 0.7156607 . . . #> #> chr1_1_5147117 5.006974 1.8883481 . . . #> chr1_5147118_10294233 . 0.6625026 . 4.8526541 . #> chr1_10294234_15441350 5.653289 0.6534358 0.5660376 0.5196788 . #> chr1_15441351_20588466 . 1.0571307 . 0.5270865 0.9400888 #> chr1_20588467_25735583 . 1.0621540 4.3409264 0.8749231 0.5800483 #> chr1_25735584_30882699 . 0.6629748 5.2933214 . . #> #> chr1_1_5147117 0.6796228 . . . . #> chr1_5147118_10294233 0.6822047 0.8721127 4.987376 1.0023929 . #> chr1_10294234_15441350 . 4.8142897 1.093225 . 3.7397341 #> chr1_15441351_20588466 . . 1.954563 0.6215737 0.4739862 #> chr1_20588467_25735583 4.0628463 5.2593090 . 0.6251397 . #> chr1_25735584_30882699 . 0.8726799 . . . #> #> chr1_1_5147117 . 0.6921302 . 5.7962588 . #> chr1_5147118_10294233 . . . 1.0286182 . #> chr1_10294234_15441350 0.7446273 . . . 0.592837 #> chr1_15441351_20588466 . 3.8526583 0.6927251 . 5.449028 #> chr1_20588467_25735583 . . . 0.6444638 . #> chr1_25735584_30882699 . 0.6952332 . 1.3079072 . #> #> chr1_1_5147117 . 0.6702686 . 5.1654987 1.08256 . #> chr1_5147118_10294233 . . 1.1744791 1.3410840 . . #> chr1_10294234_15441350 . . 0.5490436 . . . #> chr1_15441351_20588466 1.860572 1.3551889 0.9122968 . . . #> chr1_20588467_25735583 . . . . . 0.6345325 #> chr1_25735584_30882699 . 5.1965693 . 0.6637078 . . #> #> chr1_1_5147117 . . . 0.5279286 0.6445570 5.6211850 #> chr1_5147118_10294233 1.0457953 . . . 0.6470443 0.9808123 #> chr1_10294234_15441350 1.0336376 . 5.6663288 5.4175851 . . #> chr1_15441351_20588466 3.0139293 . 1.2306904 0.5298181 5.1733098 . #> chr1_20588467_25735583 0.6571927 . . . 1.0412189 . #> chr1_25735584_30882699 . . 0.7946832 . . . #> #> chr1_1_5147117 . . . 0.7171064 1.876083 . #> chr1_5147118_10294233 . . 1.206763 . . 0.6263537 #> chr1_10294234_15441350 . . . 1.1212578 . . #> chr1_15441351_20588466 . . . . . 0.6260615 #> chr1_20588467_25735583 0.6306479 . . . . . #> chr1_25735584_30882699 . . . 5.5381410 . . #> #> chr1_1_5147117 . 5.6585479 . 5.1173846 . #> chr1_5147118_10294233 1.0357140 . . 0.5952598 . #> chr1_10294234_15441350 . . . 0.5868670 . #> chr1_15441351_20588466 . . . . . #> chr1_20588467_25735583 4.9157334 . 0.9477688 5.1535560 4.612408 #> chr1_25735584_30882699 0.6468123 0.5749567 . 0.5956971 . #> #> chr1_1_5147117 4.674518 0.6009777 0.6487963 0.7451421 . #> chr1_5147118_10294233 . . 0.6512952 1.1709591 . #> chr1_10294234_15441350 . 0.5948666 . . 4.8874664 #> chr1_15441351_20588466 . . 0.6509947 . . #> chr1_20588467_25735583 . 0.9813949 0.6546805 1.1758351 . #> chr1_25735584_30882699 . . 0.6517618 0.7484054 0.9697006 #> #> chr1_1_5147117 . . 5.160488 . . #> chr1_5147118_10294233 0.5487019 . 1.219567 0.5940201 0.9741146 #> chr1_10294234_15441350 0.5408028 . 5.983118 . . #> chr1_15441351_20588466 0.5484368 . . . 0.6009732 #> chr1_20588467_25735583 . . . 0.9685058 . #> chr1_25735584_30882699 5.0075547 0.5926745 . . . #> #> chr1_1_5147117 . 0.7558573 1.0896667 . . #> chr1_5147118_10294233 1.7083329 1.1850081 1.0931395 0.5860567 . #> chr1_10294234_15441350 0.9076593 . . 0.5777596 0.6883016 #> chr1_15441351_20588466 1.7078187 . . 0.5857782 . #> chr1_20588467_25735583 . . . . . #> chr1_25735584_30882699 . . 0.6895308 0.5864890 . #> #> chr1_1_5147117 . . . 0.7677232 0.6103603 #> chr1_5147118_10294233 . . . . . #> chr1_10294234_15441350 . . . . . #> chr1_15441351_20588466 5.643066 . 0.6849263 . 6.2237735 #> chr1_20588467_25735583 . 0.7491784 0.6887458 1.2054515 5.8386061 #> chr1_25735584_30882699 4.375962 0.7459747 4.0284074 . . #> #> chr1_1_5147117 . . . 4.9170485 0.6343041 #> chr1_5147118_10294233 0.5297502 . 0.565503 . 0.6367631 #> chr1_10294234_15441350 . . . . . #> chr1_15441351_20588466 . 5.0164613 . 0.6188304 . #> chr1_20588467_25735583 5.3230220 0.6413309 . . . #> chr1_25735584_30882699 0.5301511 . . 0.6195702 . #> #> chr1_1_5147117 . . 5.0227037 0.8656106 0.6649924 #> chr1_5147118_10294233 . . . 5.4013056 0.6675352 #> chr1_10294234_15441350 . . 5.1439919 5.3047422 . #> chr1_15441351_20588466 0.6162603 . 0.6132712 . 0.6672295 #> chr1_20588467_25735583 0.9995757 . 0.6168028 . . #> chr1_25735584_30882699 . 0.5936328 . . . #> #> chr1_1_5147117 . . . . 0.9645153 #> chr1_5147118_10294233 . . . . 5.4251069 #> chr1_10294234_15441350 . 4.596872 . 0.6216544 . #> chr1_15441351_20588466 4.942907 0.664314 1.4330553 . 0.9673646 #> chr1_20588467_25735583 . . 0.7285330 0.6337126 . #> chr1_25735584_30882699 . . 0.7253892 0.6308609 0.5970815 #> #> chr1_1_5147117 . 0.5666128 0.6884076 5.536278 1.0128924 #> chr1_5147118_10294233 . . 5.3138675 . 0.6320018 #> chr1_10294234_15441350 0.6945808 . . 4.184175 . #> chr1_15441351_20588466 1.1126909 . . . . #> chr1_20588467_25735583 . 0.9335116 . . . #> chr1_25735584_30882699 1.1137670 4.3228335 0.6914991 . 1.0168470 #> #> chr1_1_5147117 . . . 1.0800501 . . #> chr1_5147118_10294233 . 1.1134371 . . . 0.6141474 #> chr1_10294234_15441350 0.6450651 . . 0.6725865 . 1.2518591 #> chr1_15441351_20588466 . 0.7039689 . . . . #> chr1_20588467_25735583 . . . . . . #> chr1_25735584_30882699 . 1.6279846 . . 0.8376106 . #> #> chr1_1_5147117 . . . . . #> chr1_5147118_10294233 . . . . 1.025408 #> chr1_10294234_15441350 5.4574742 0.8991196 0.5721285 0.7880839 . #> chr1_15441351_20588466 . 0.5550844 . 5.1613932 . #> chr1_20588467_25735583 0.4993380 1.1766359 . . 1.029941 #> chr1_25735584_30882699 0.4969506 . 0.5807950 0.7989190 1.026033 #> #> chr1_1_5147117 0.9693162 0.6339089 1.8739358 #> chr1_5147118_10294233 0.6001317 1.2998672 . #> chr1_10294234_15441350 . . . #> chr1_15441351_20588466 0.5998484 0.6360712 . #> chr1_20588467_25735583 . 1.0266907 0.6576975 #> chr1_25735584_30882699 . . .