Coverage plot using Sushi

Source: R/plotting_functions.R

Coverage plot using Sushi

plot_coverage_BigWig(
  coverages,
  label_color_list,
  peaks = NULL,
  chrom,
  start,
  end,
  ref = "hg38"
)

Arguments

coverages

A list containing sample coverage as GenomicRanges
label_color_list

List of colors, list names are labels
peaks

A GRanges object containing peaks location to plot (optional)
chrom

Chromosome
start

Start
end

End
ref

Genomic Reference

Value

A coverage plot annotated with genes

Examples

data(scExp)
plot_intra_correlation_scExp(scExp)