Package: CBN2Path
Title:  CBN2Path: an R/Bioconductor package for the analysis of cancer progression pathways using Conjunctive Bayesian Networks
Version: 1.1.4
Author: William Choi-Kim [aut, cre], Sayed-Rzgar Hosseini [aut, cre]
Maintainer: William Choi-Kim <william@williamck.com>, Sayed-Rzgar Hosseini <razgar@gmail.com>
Description: CBN2Path package provides a unifying interface to facilitate CBN-based quantification, analysis and visualization of cancer progression pathways. 
URL: https://github.com/rockwillck/CBN2Path, http://dx.doi.org/10.1093/biomet/asp023, http://dx.doi.org/10.1093/bioinformatics/btp505
BugReports: https://github.com/rockwillck/CBN2Path/issues
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Imports: 
    R6,
    ggraph,
    tidygraph,
    ggplot2,
    patchwork,
    cowplot,
    magrittr,
    igraph,
    rlang,
    grDevices,
    coda,
    graphics,
    stats,
    TCGAbiolinks,
    BiocParallel
Suggests: 
    testthat (>= 3.0.0), BiocStyle, knitr, rmarkdown
Depends:
    R (>= 4.1.0)
Config/testthat/edition: 3
biocViews: Software, StatisticalMethod, GraphAndNetwork, Bayesian, Pathways
VignetteBuilder: knitr
SystemRequirements: GNU Scientific Library (GSL)
OS_type: unix
git_url: https://git.bioconductor.org/packages/CBN2Path
git_branch: devel
git_last_commit: 8ea4403
git_last_commit_date: 2025-11-15
Repository: Bioconductor 3.23
