Package: BiocGenerics
Title: S4 generic functions used in Bioconductor
Description: The package defines many S4 generic functions used in Bioconductor.
biocViews: Infrastructure
URL: https://bioconductor.org/packages/BiocGenerics
BugReports: https://github.com/Bioconductor/BiocGenerics/issues
Version: 0.57.0
License: Artistic-2.0
Encoding: UTF-8
Authors@R: c(
	person("The Bioconductor Dev Team", role="aut"),
	person("Hervé", "Pagès", role=c("aut", "cre"),
		email="hpages.on.github@gmail.com",
		comment=c(ORCID="0009-0002-8272-4522")),
	person("Laurent", "Gatto", role="ctb",
		email="laurent.gatto@uclouvain.be",
		comment=c(ORCID="0000-0002-1520-2268")),
	person("Nathaniel", "Hayden", role="ctb"),
	person("James", "Hester", role="ctb"),
	person("Wolfgang", "Huber", role="ctb"),
	person("Michael", "Lawrence", role="ctb"),
	person("Martin", "Morgan", role="ctb",
		email="mtmorgan.xyz@gmail.com",
		comment=c(ORCID="0000-0002-5874-8148")),
	person("Valerie", "Obenchain", role="ctb"))
Depends: R (>= 4.0.0), methods, utils, graphics, stats, generics
Imports: methods, utils, graphics, stats
Suggests: Biobase, S4Vectors, IRanges, S4Arrays, SparseArray, DelayedArray,
	HDF5Array, GenomicRanges, pwalign, Rsamtools, AnnotationDbi, affy,
	affyPLM, DESeq2, flowClust, MSnbase, annotate, MultiAssayExperiment,
	RUnit
Collate: S3-classes-as-S4-classes.R
	utils.R
	normarg-utils.R
	replaceSlots.R
	aperm.R
	append.R
	as.data.frame.R
	as.list.R
	as.vector.R
	cbind.R
	do.call.R
	duplicated.R
	eval.R
	Extremes.R
	format.R
	funprog.R
	get.R
	grep.R
	is.unsorted.R
	lapply.R
	mapply.R
	match.R
	mean.R
	nrow.R
	order.R
	paste.R
	rank.R
	rep.R
	row_colnames.R
	saveRDS.R
	sort.R
	start.R
	subset.R
	t.R
	table.R
	tapply.R
	unique.R
	unlist.R
	unsplit.R
	which.R
	which.min.R
	relist.R
	boxplot.R
	image.R
	density.R
	IQR.R
	mad.R
	residuals.R
	var.R
	weights.R
	xtabs.R
	setops.R
	annotation.R
	combine.R
	containsOutOfMemoryData.R
	dbconn.R
	dge.R
	dims.R
	fileName.R
	longForm.R
	normalize.R
	Ontology.R
	organism_species.R
	paste2.R
	path.R
	plotMA.R
	plotPCA.R
	score.R
	strand.R
	toTable.R
	type.R
	updateObject.R
	testPackage.R
	zzz.R
git_url: https://git.bioconductor.org/packages/BiocGenerics
git_branch: devel
git_last_commit: 5fcc999
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
