Package: Bioc.gff
Title: Read and write GFF and GTF files
Version: 1.1.0
Date: 2025-09-24
Authors@R: c(
    person("Michael", "Lawrence", role = "aut"),
    person("Hervé", "Pagès", role = "aut"),
    person("Marcel", "Ramos", role = "ctb"),
    person(
      "Bioconductor", "Package Maintainer", ,
      "maintainer@bioconductor.org", "cre"
    )
  )
Description: Parse GFF and GTF files using C++ classes. The package also
    provides utilities to read and write GFF3 files. The GFF (General Feature
    Format) format is a tab-delimited file format for describing genes and
    other features of DNA, RNA, and protein sequences. GFF files are often
    used to describe the features of genomes.
Depends: R (>= 4.5.0)
Imports:
  BiocBaseUtils,
  BiocGenerics,
  BiocIO,
  curl,
  GenomicRanges,
  IRanges,
  methods,
  Rsamtools,
  S4Vectors,
  Seqinfo,
  stats,
  utils,
  XVector
Suggests:
  BiocFileCache,
  BiocStyle,
  GenomicFeatures,
  GenomeInfoDbData,
  knitr,
  httr2,
  rmarkdown,
  rvest,
  tinytest,
  txdbmaker,
  TxDb.Hsapiens.UCSC.hg19.knownGene
VignetteBuilder: knitr
LinkingTo:
  S4Vectors,
  XVector,
  IRanges
License: Artistic-2.0
biocViews: Software, Infrastructure, DataImport
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
URL: https://github.com/Bioconductor/Bioc.gff
BugReports: https://github.com/Bioconductor/Bioc.gff/issues
Collate: 
    'Bioc.gff-package.R'
    'GFF-coercion.R'
    'readGFF.R'
    'GFFFile-class.R'
    'index.R'
    'metadataFromNCBI.R'
    'utilities.R'
git_url: https://git.bioconductor.org/packages/Bioc.gff
git_branch: devel
git_last_commit: a3d3863
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
