Package: BioTIP
Type: Package
Title: BioTIP: An R package for characterization of Biological Tipping-Point
Version: 1.25.0
Author: Zhezhen Wang, Andrew Goldstein, Yuxi Sun, Biniam Feleke, Qier An, Antonio Feliciano, Xinan Yang
Maintainer: Felix Yu <felixy@uchicago.edu> and X Holly Yang <xyang2@uchicago.edu>
Description: Adopting tipping-point theory to transcriptome profiles 
     to unravel disease regulatory trajectory.
Depends: R (>= 3.6)
License: GPL-2
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.0
Suggests: 
    knitr,
    markdown,
    base,
    rmarkdown,
    ggplot2
VignetteBuilder: knitr
biocViews: Sequencing, RNASeq, GeneExpression, Transcription, Software
URL: https://github.com/xyang2uchicago/BioTIP
Imports: 
    igraph,
    cluster,
    psych,
    stringr,
    GenomicRanges,
    MASS, 
    scran,
    methods,
    stats,
    utils,
    grDevices,
    graphics,
    foreach,
    doParallel
git_url: https://git.bioconductor.org/packages/BioTIP
git_branch: devel
git_last_commit: ba9af28
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
